Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902442.1_cds_XP_016452472.1_46710
CDS Infomation

[gene=LOC107777025] [db_xref=GeneID:107777025] [protein=protein ROOT PRIMORDIUM DEFECTIVE 1-like] [protein_id=XP_016452472.1] [location=11101..12441] [gbkey=CDS]
Sequence

ATGCTCAACCGTATTGGTAGACGTGGATGTTTTTCTGCTGAACTGAATACATCAATTGCA
TTCTTATTCATAGATTCTTCAGCAATCTTGCAATGGCACCGATCAATGACCACCAGTAAA
AGAGTCCAAGACAGAAGCAAGAAGAAGCGGGTGCATGACCTTGAAATAGCCACAGAAAAG
CACAAGATCCTTTCCAAAGTCCTATTAATATTTGAAGTCCTCAAACAGGAGCCTCAACAA
ATCATATCAATTAGGGAACTTGATCAGTATAGGAGGCAAATAAACCTTCCAAAGCCCCAT
AAAATCTCGGCTTTTCTACGGAAGTCCCCCAAGCTTTTTGAACTGTACAAGGATCATAGA
GGGATTTTATGGTGTGGTATGACAAAGGAGGCTGAAGGTTTAGTCCGAGAAGAGGAAGCT
ATTATTGAGCAGCAGAGTGATAAAGCTGCAGAGCTTGTAACTAGGATGCTGATGATGTCC
GTGGACAAGCGCCTTGCCTTAGATAAGATTGTTCATTTCAGAAGAGATTTGGGGTTGCCA
ATGGATTTTAGGAACCATTGGGTGCACAGATTTCCTGATTACTTTAGAGTTGTTCATCCA
TTTAAACCTTATGATGAAAGTGAGTATTTAGAGCTTGTGAATTGGAGATCGAGTTGGGCT
ATGACAGAGTTAGAAAGGAAGGCGCTTGGTGGTATGCAGGCCCCAGATGATCACGTAGCT
GGTCTTCTTTCCTTGTCTTTCCCAATGAAATTCCCACCTGATTATAAACAAATTTTGTCT
AGATATAAAGGGAAGATAGAGAATTTTCAGAAGCGGGAATACTTGTCGCCTTATGCAGAT
GCCAGGGAACTAAAGGCTGGCACACTGGAGTTCAATAAGAGGGCGGTTGCAGTGATGCAT
GAGCTGCTGAGCTTCACTATTGAAAAGAGGTTGGTGACAGATTATTTGACACATTTTAGG
AGGGAGTTCGTAATGCCTCAGAAGCTGATGAGGCTGTTGCTTAAACATTTTGGAATCTTT
TATGTTTCAGAGAGGGGTAAGAGATTTCATGTATTTCTTAATAGTGCTTATGAAGGTTCT
GAGTTGATCGAGAAGCACCCTTTGACTGTTTGGAGGGAAAAGGTTCTAAGTTTTGTTGGA
TACAGAAAGAAGAAGGAAACAATGGATACTCTTAAAGATTTGCAGGAATTCGTGGATGAT
GATTTGCTTGAGAATGAGTCAGAAGATGAAAGTGTTCAAGTGGAAAATAACGAGCATAAT
ATGGGTAGTTTGGAGGGAGATCTTCTGGAAGATGAATCCGAGATGGAGATTGATGAAGTT
TATAGTGCATACAGGGAATGA

Peptide Sequence

PEP ID

XP_016452472.1
PEP Infomation

PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Nicotiana tabacum]
Sequence

MLNRIGRRGCFSAELNTSIAFLFIDSSAILQWHRSMTTSKRVQDRSKKKRVHDLEIATEK
HKILSKVLLIFEVLKQEPQQIISIRELDQYRRQINLPKPHKISAFLRKSPKLFELYKDHR
GILWCGMTKEAEGLVREEEAIIEQQSDKAAELVTRMLMMSVDKRLALDKIVHFRRDLGLP
MDFRNHWVHRFPDYFRVVHPFKPYDESEYLELVNWRSSWAMTELERKALGGMQAPDDHVA
GLLSLSFPMKFPPDYKQILSRYKGKIENFQKREYLSPYADARELKAGTLEFNKRAVAVMH
ELLSFTIEKRLVTDYLTHFRREFVMPQKLMRLLLKHFGIFYVSERGKRFHVFLNSAYEGS
ELIEKHPLTVWREKVLSFVGYRKKKETMDTLKDLQEFVDDDLLENESEDESVQVENNEHN
MGSLEGDLLEDESEMEIDEVYSAYRE

Transcript Sequence

Gene sequence data has not been registered.